MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,289
rRNA: 17
tRNA: 64
tmRNA: 1
Total number of protein coding genes annotated/found:
2,252
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Items 41 - 60
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5007|JADGMA010000010.1
MBF0710880.1
Genome Viewer
NA
AA
810/270
40878-40069
energy-coupling factor transporter ATPase
SEQF5007|JADGMA010000010.1
MBF0710881.1
Genome Viewer
NA
AA
369/123
41736-41368
50S ribosomal protein L17
SEQF5007|JADGMA010000010.1
MBF0710882.1
Genome Viewer
NA
AA
945/315
42697-41753
DNA-directed RNA polymerase subunit alpha
SEQF5007|JADGMA010000010.1
MBF0710883.1
Genome Viewer
NA
AA
390/130
43163-42774
30S ribosomal protein S11
SEQF5007|JADGMA010000010.1
MBF0710884.1
Genome Viewer
NA
AA
366/122
43551-43186
30S ribosomal protein S13
SEQF5007|JADGMA010000010.1
MBF0710885.1
Genome Viewer
NA
AA
114/38
43687-43574
50S ribosomal protein L36
SEQF5007|JADGMA010000010.1
MBF0710886.1
Genome Viewer
NA
AA
219/73
43937-43719
translation initiation factor IF-1
SEQF5007|JADGMA010000010.1
MBF0710887.1
Genome Viewer
NA
AA
648/216
44773-44126
adenylate kinase
SEQF5007|JADGMA010000010.1
MBF0710888.1
Genome Viewer
NA
AA
1293/431
46083-44791
preprotein translocase subunit SecY
SEQF5007|JADGMA010000010.1
MBF0710889.1
Genome Viewer
NA
AA
441/147
46523-46083
50S ribosomal protein L15
SEQF5007|JADGMA010000010.1
MBF0710890.1
Genome Viewer
NA
AA
180/60
46719-46540
50S ribosomal protein L30
SEQF5007|JADGMA010000010.1
MBF0710891.1
Genome Viewer
NA
AA
501/167
47236-46736
30S ribosomal protein S5
SEQF5007|JADGMA010000010.1
MBF0710892.1
Genome Viewer
NA
AA
363/121
47619-47257
50S ribosomal protein L18
SEQF5007|JADGMA010000010.1
MBF0710893.1
Genome Viewer
NA
AA
537/179
48187-47651
50S ribosomal protein L6
SEQF5007|JADGMA010000010.1
MBF0710894.1
Genome Viewer
NA
AA
399/133
48611-48213
30S ribosomal protein S8
SEQF5007|JADGMA010000010.1
MBF0710895.1
Genome Viewer
NA
AA
186/62
48828-48643
type Z 30S ribosomal protein S14
SEQF5007|JADGMA010000010.1
MBF0710896.1
Genome Viewer
NA
AA
540/180
49391-48852
50S ribosomal protein L5
SEQF5007|JADGMA010000010.1
MBF0710897.1
Genome Viewer
NA
AA
318/106
49734-49417
50S ribosomal protein L24
SEQF5007|JADGMA010000010.1
MBF0710898.1
Genome Viewer
NA
AA
369/123
50143-49775
50S ribosomal protein L14
SEQF5007|JADGMA010000010.1
MBF0710899.1
Genome Viewer
NA
AA
264/88
50437-50174
30S ribosomal protein S17
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Items 41 - 60
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* Click GI,UID,Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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